Equipment
The nano-liquid chromatography system and the Orbitrap Elite mass spectrometer
- Thermo Scientific Orbitrap Elite mass spectrometer
- Thermo Scientific Q Exactive Plus mass spectrometer
- Thermo Scientific Ultimate 3000 RSLCnano liquid chromatography system (2 x)
- Waters Alliance HPLC system for peptide chromatography
- Gel electrophoresis (1D/2D) equipment
Data analysis:
- MaxQuant (peptide/protein identification and quantification)
- Perseus (Statistical data analysis)
- Cytoscape (Network analysis)